Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family transposase | NQ490_09680 | C4Z1J4 | + | 2062148 - 2063875 | 61542.8 |
| azlc family abc transporter permease | NQ490_09685 | O07942 | + | 2064070 - 2064774 | 25185.0 |
| branched-chain amino acid transporter permease | NQ490_09690 | O07923 | + | 2064761 - 2065099 | 11854.2 |
| citrate synthase | NQ490_09695 | Q59977 | - | 2065135 - 2066517 | 51655.0 |
| hydratase | NQ490_09700 | P75764 | + | 2066833 - 2069079 | 80625.5 |
| ai-2e family transporter | NQ490_09705 | O32095 | + | 2069214 - 2070359 | 40280.1 |
| ai-2e family transporter | NQ490_09710 | O32095 | + | 2070436 - 2071647 | 44490.3 |
| sufd family fe-s cluster assembly protein | NQ490_09715 | Q50519 | - | 2071710 - 2072627 | 32532.6 |
| atp-binding cassette domain-containing protein | NQ490_09720 | Q60350 | - | 2072627 - 2073367 | 26853.3 |
| asparagine synthase b | NQ490_09725 | P19891 | + | 2073917 - 2075497 | 59457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.