Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | NQ490_09580 | Not Available | + | 2037948 - 2038448 | 18844.6 |
| gfo/idh/moca family oxidoreductase | NQ490_09585 | Q9TV69 | - | 2038510 - 2039514 | 36794.2 |
| fad-dependent oxidoreductase | NQ490_09590 | Q58065 | + | 2039745 - 2042315 | 91583.8 |
| alpha/beta hydrolase | NQ490_09595 | P96402 | - | 2042380 - 2043327 | 34330.9 |
| slc13 family permease | NQ490_09600 | P72958 | + | 2043696 - 2044976 | 45336.2 |
| mannonate dehydratase | NQ490_09605 | Q4L321 | + | 2045033 - 2046007 | 36227.5 |
| 2-hydroxy-3-oxopropionate reductase | NQ490_09610 | P0ABQ3 | + | 2046305 - 2047192 | 31135.2 |
| dihydrodipicolinate synthase family protein | NQ490_09615 | B9K865 | + | 2047216 - 2048133 | 33189.3 |
| glycerate kinase | NQ490_09620 | Q9X1S1 | + | 2048161 - 2049396 | 42490.7 |
| sigma 54-interacting transcriptional regulator | NQ490_09625 | P54529 | - | 2049472 - 2051373 | 72080.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.