Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic sulfatase maturase | NQ490_09530 | A0Q2E1 | + | 2027016 - 2028146 | 42174.0 |
| m14 family metallopeptidase | NQ490_09535 | E1V7W0 | - | 2028200 - 2029153 | 35219.2 |
| m14 family metallopeptidase | NQ490_09540 | E1V7W0 | - | 2029150 - 2030070 | 32904.3 |
| transglutaminase family protein | NQ490_09545 | Q49757 | - | 2030097 - 2030870 | 28333.4 |
| alpha-e domain-containing protein | NQ490_09550 | Not Available | - | 2030867 - 2031538 | 25263.5 |
| circularly permuted type 2 atp-grasp protein | NQ490_09555 | Q55587 | - | 2031520 - 2032833 | 49175.6 |
| response regulator transcription factor | NQ490_09560 | Q4L6C6 | + | 2033583 - 2034263 | 25928.4 |
| hypothetical protein | NQ490_09565 | Not Available | + | 2034260 - 2035642 | 49685.9 |
| hamp domain-containing histidine kinase | NQ490_09570 | P0A601 | + | 2035663 - 2037090 | 51222.5 |
| hypothetical protein | NQ490_09575 | Not Available | + | 2037080 - 2037847 | 27340.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.