Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4038 domain-containing protein | NQ490_09430 | Not Available | - | 1993966 - 1995288 | 50062.7 |
| 6-phospho-beta-glucosidase | NQ490_09435 | P24240 | - | 1995299 - 1996738 | 54423.0 |
| laci family dna-binding transcriptional regulator | NQ490_09440 | B6EH86 | - | 1996767 - 1997774 | 37621.6 |
| pts transporter subunit eiic | NQ490_09445 | Q9KF90 | + | 1997974 - 1999356 | 48308.2 |
| prolyl oligopeptidase family serine peptidase | NQ490_09450 | Q750X7 | + | 1999445 - 2000701 | 46490.2 |
| l-fucose/l-arabinose isomerase family protein | NQ490_09455 | Not Available | + | 2000720 - 2002126 | 52031.8 |
| transketolase | NQ490_09460 | A6KXB4 | + | 2002123 - 2002959 | 30475.2 |
| transketolase family protein | NQ490_09465 | A6KXB3 | + | 2002952 - 2003887 | 33073.6 |
| glycerol kinase glpk | NQ490_09470 | Q67Q63 | + | 2003884 - 2005401 | 53981.4 |
| phosphoketolase family protein | NQ490_09475 | Q97JE3 | + | 2005412 - 2007775 | 89001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.