Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | NQ490_09280 | Q65GC0 | - | 1958772 - 1960250 | 55148.6 |
| fggy-family carbohydrate kinase | NQ490_09285 | P44401 | - | 1960264 - 1961847 | 56194.9 |
| pocr ligand-binding domain-containing protein | NQ490_09290 | Q05587 | + | 1961944 - 1962792 | 32228.9 |
| gtra family protein | NQ490_09295 | Not Available | - | 1962989 - 1963651 | 24002.7 |
| duf4982 domain-containing protein | NQ490_09300 | A7LXS9 | - | 1963665 - 1966061 | 88914.4 |
| hypothetical protein | NQ490_09305 | Not Available | - | 1966155 - 1966553 | 14231.1 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_09310 | P15885 | - | 1966555 - 1969518 | 106656.0 |
| bacterial ig-like domain-containing protein | NQ490_09315 | Not Available | - | 1969535 - 1970182 | 24208.4 |
| atp-binding protein | NQ490_09320 | Not Available | - | 1970375 - 1971703 | 50709.5 |
| lyttr family dna-binding domain-containing protein | NQ490_09325 | Q8EQQ3 | - | 1971700 - 1972407 | 27535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.