Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ490_09180 | P0AGI3 | + | 1938252 - 1939202 | 32922.9 |
| mbl fold metallo-hydrolase | NQ490_09185 | Q5F336 | + | 1939222 - 1940094 | 32400.3 |
| ammememoradisam system radical sam enzyme | NQ490_09190 | Q58218 | - | 1940176 - 1941000 | 30461.6 |
| ammememoradisam system protein a | NQ490_09195 | Q8R8N9 | - | 1940997 - 1942385 | 50217.3 |
| prolyl-trna synthetase associated domain-containing protein | NQ490_09200 | Q9L4Q7 | - | 1942423 - 1942914 | 18652.1 |
| lysr family transcriptional regulator | NQ490_09205 | P94387 | + | 1943036 - 1943923 | 33031.7 |
| hypothetical protein | NQ490_09210 | Not Available | + | 1944065 - 1944742 | 24528.6 |
| sdr family oxidoreductase | NQ490_09215 | E0D7H5 | + | 1944636 - 1945418 | 27626.5 |
| dna/rna nuclease sfsa | NQ490_09220 | Q24PG6 | + | 1945504 - 1946187 | 24930.9 |
| abc transporter substrate-binding protein | NQ490_09225 | Q578M8 | - | 1946265 - 1947620 | 48565.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.