Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease yjff | NQ490_09080 | P37772 | + | 1910096 - 1911130 | 37004.8 |
| fucose isomerase | NQ490_09085 | Not Available | + | 1911212 - 1912702 | 54515.2 |
| hypothetical protein | NQ490_09090 | Not Available | + | 1912900 - 1913691 | 28331.6 |
| murr/rpir family transcriptional regulator | NQ490_09095 | Q8RD36 | - | 1913740 - 1914525 | 28908.8 |
| lyttr family dna-binding domain-containing protein | NQ490_09100 | Q8ZBV2 | + | 1914717 - 1915421 | 26470.7 |
| ghkl domain-containing protein | NQ490_09105 | Not Available | + | 1915423 - 1916772 | 50071.1 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_09110 | P15885 | + | 1916989 - 1920264 | 118828.0 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ490_09115 | P14002 | + | 1920396 - 1922825 | 88703.1 |
| hypothetical protein | NQ490_09120 | Not Available | + | 1922829 - 1923434 | 22534.7 |
| is200/is605 family transposase | NQ490_09125 | P40714 | - | 1923499 - 1924797 | 48336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.