Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-alpha-glucosidase | NQ490_09030 | Q034G9 | + | 1897211 - 1898536 | 49605.6 |
| dihydroxy-acid dehydratase | NQ490_09035 | A3DIY3 | + | 1898608 - 1900350 | 61900.1 |
| response regulator | NQ490_09040 | O31517 | + | 1900627 - 1902249 | 61350.2 |
| sensor histidine kinase | NQ490_09045 | O31516 | + | 1902246 - 1903727 | 55682.2 |
| abc transporter substrate-binding protein | NQ490_09050 | P39325 | + | 1903672 - 1904652 | 36143.5 |
| substrate-binding domain-containing protein | NQ490_09055 | Q9KBQ0 | - | 1904722 - 1905558 | 31071.3 |
| is200/is605 family transposase | NQ490_09060 | O31459 | - | 1905592 - 1905714 | 4758.66 |
| abc transporter substrate-binding protein | NQ490_09065 | P39325 | + | 1906310 - 1907404 | 38729.6 |
| sugar abc transporter atp-binding protein | NQ490_09070 | P63299 | + | 1907507 - 1909036 | 56092.2 |
| abc transporter permease | NQ490_09075 | P39328 | + | 1909020 - 1910099 | 37433.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.