Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | NQ490_08980 | Not Available | + | 1887433 - 1888272 | 29833.7 |
| duf554 domain-containing protein | NQ490_08985 | P96689 | + | 1888379 - 1889098 | 24848.4 |
| alpha/beta hydrolase | NQ490_08990 | A2BGU9 | + | 1889117 - 1889842 | 26024.8 |
| nad(p)/fad-dependent oxidoreductase | NQ490_08995 | P50971 | - | 1889901 - 1890797 | 31335.8 |
| zip family metal transporter | NQ490_09000 | Q6P6S2 | - | 1890914 - 1891696 | 27311.0 |
| hypothetical protein | NQ490_09005 | Not Available | - | 1891777 - 1892013 | 8124.09 |
| alpha/beta hydrolase | NQ490_09010 | I6Y9F7 | - | 1892189 - 1893088 | 33662.2 |
| nickel-dependent lactate racemase | NQ490_09015 | F9USS9 | - | 1893114 - 1894412 | 46862.7 |
| murr/rpir family transcriptional regulator | NQ490_09020 | P46117 | + | 1894636 - 1895412 | 28810.6 |
| pts transporter subunit eiic | NQ490_09025 | P19642 | + | 1895595 - 1897196 | 57813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.