Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_08880 | Not Available | - | 1864979 - 1865359 | 14409.7 |
| hypothetical protein | NQ490_08885 | Not Available | + | 1865591 - 1866085 | 18148.4 |
| hypothetical protein | NQ490_08890 | Not Available | + | 1866171 - 1866833 | 24401.2 |
| is200/is605 family transposase | NQ490_08895 | Q8KAE4 | + | 1867051 - 1867542 | 17474.2 |
| dna-3-methyladenine glycosylase 2 family protein | NQ490_08900 | O08760 | + | 1867654 - 1868472 | 30456.6 |
| metal-sensing transcriptional repressor | NQ490_08905 | O32222 | + | 1868654 - 1868974 | 12182.8 |
| heavy metal translocating p-type atpase | NQ490_08910 | O32220 | + | 1869017 - 1871569 | 90097.6 |
| heavy-metal-associated domain-containing protein | NQ490_08915 | Q52109 | + | 1871651 - 1871869 | 7361.98 |
| phosphatase pap2 family protein | NQ490_08920 | Q6P0E8 | - | 1871928 - 1872800 | 30830.8 |
| lysr family transcriptional regulator | NQ490_08925 | Q05840 | + | 1873049 - 1873966 | 34675.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.