Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | NQ490_08680 | P96631 | + | 1822587 - 1823285 | 25949.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | NQ490_08685 | P08874 | - | 1823327 - 1823578 | 8945.1 |
| n-acetylmuramoyl-l-alanine amidase | NQ490_08690 | P37134 | + | 1823919 - 1824845 | 33066.7 |
| spoiie family protein phosphatase | NQ490_08695 | P37475 | + | 1825085 - 1827373 | 78031.5 |
| elongation factor g | NQ490_08700 | Q9X1Y4 | + | 1827617 - 1829692 | 74419.3 |
| glutamate--trna ligase | NQ490_08705 | A7FSY9 | - | 1829870 - 1831315 | 53618.9 |
| gtpase hflx | NQ490_08710 | Q8RAS5 | - | 1831380 - 1832663 | 46655.1 |
| gnat family n-acetyltransferase | NQ490_08715 | O34569 | - | 1832660 - 1833238 | 22161.0 |
| hypothetical protein | NQ490_08720 | Not Available | - | 1833250 - 1834701 | 52614.7 |
| hypothetical protein | NQ490_08725 | Not Available | - | 1834714 - 1836027 | 50748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.