Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | NQ490_08180 | P94414 | - | 1707277 - 1708368 | 40658.1 |
| response regulator transcription factor | NQ490_08185 | Q2YZ24 | - | 1708365 - 1709036 | 25217.5 |
| c69 family dipeptidase | NQ490_08190 | Q8G6Z9 | + | 1709372 - 1710832 | 54589.3 |
| mate family efflux transporter | NQ490_08195 | Q99WP2 | + | 1711051 - 1712460 | 50929.1 |
| hypothetical protein | NQ490_08200 | Not Available | + | 1712521 - 1712940 | 16612.9 |
| glycosyltransferase | NQ490_08205 | P71237 | + | 1713106 - 1714230 | 42582.2 |
| glycosyltransferase | NQ490_08210 | Not Available | - | 1714326 - 1715471 | 43109.7 |
| duf6077 domain-containing protein | NQ490_08215 | Not Available | - | 1715511 - 1716545 | 38667.4 |
| hypothetical protein | NQ490_08220 | Not Available | - | 1716529 - 1717365 | 31624.0 |
| wzz/fepe/etk n-terminal domain-containing protein | NQ490_08225 | P96716 | - | 1717396 - 1718682 | 44530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.