Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | NQ490_08080 | Not Available | - | 1690296 - 1690568 | 9827.99 |
| helix-turn-helix domain-containing protein | NQ490_08085 | O32236 | + | 1690801 - 1691382 | 22904.0 |
| helix-turn-helix domain-containing protein | NQ490_08090 | P0A9U6 | - | 1691450 - 1691761 | 11916.4 |
| duf1273 domain-containing protein | NQ490_08095 | Q9KC06 | + | 1691893 - 1692399 | 19489.5 |
| type ii toxin-antitoxin system rele/pare family toxin | NQ490_08100 | P44031 | + | 1692461 - 1692814 | 13605.5 |
| helix-turn-helix transcriptional regulator | NQ490_08105 | P44030 | + | 1693092 - 1693364 | 10227.3 |
| hypothetical protein | NQ490_08110 | Not Available | + | 1693798 - 1694370 | 21239.3 |
| m48 family metallopeptidase | NQ490_08115 | Not Available | - | 1694701 - 1695432 | 28584.7 |
| type i restriction endonuclease subunit r | NQ490_08120 | Q60295 | - | 1695438 - 1698527 | 117601.0 |
| hypothetical protein | NQ490_08125 | Not Available | - | 1698554 - 1698712 | 5612.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.