Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| res domain-containing protein | NQ490_07630 | O31935 | - | 1598801 - 1599829 | 39934.6 |
| hypothetical protein | NQ490_07635 | Not Available | + | 1600082 - 1603663 | 137280.0 |
| parm/stba family protein | NQ490_07640 | Not Available | + | 1603881 - 1604717 | 30713.2 |
| m23 family metallopeptidase | NQ490_07645 | P0AFT0 | + | 1604714 - 1605397 | 24382.2 |
| heavy metal translocating p-type atpase | NQ490_07650 | O32219 | - | 1605455 - 1607365 | 68185.3 |
| cation transporter | NQ490_07655 | Q9RQB4 | - | 1607505 - 1607723 | 7946.72 |
| radical sam mobile pair protein b | NQ490_07660 | Q58096 | - | 1607970 - 1608884 | 34814.7 |
| radical sam mobile pair protein a | NQ490_07665 | Not Available | - | 1608872 - 1609561 | 26735.4 |
| flavin reductase family protein | NQ490_07670 | O28488 | - | 1609591 - 1610094 | 17895.4 |
| helix-turn-helix transcriptional regulator | NQ490_07675 | P96673 | + | 1610245 - 1610610 | 14101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.