Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | + | 1586784 - 1586859 | Not Available |
| beta-galactosidase | NQ490_07585 | C8WV58 | + | 1587357 - 1589357 | 75196.2 |
| laci family transcriptional regulator | NQ490_07590 | O87590 | + | 1589546 - 1590544 | 36801.3 |
| extracellular solute-binding protein | NQ490_07595 | Not Available | + | 1590851 - 1592119 | 43966.8 |
| sugar abc transporter permease | NQ490_07600 | O06990 | + | 1592229 - 1593671 | 53547.7 |
| abc transporter permease subunit | NQ490_07605 | O07011 | + | 1593668 - 1594561 | 33020.0 |
| is200/is605 family transposase | NQ490_07610 | Q65CX5 | + | 1594989 - 1596770 | 63086.1 |
| ig-like domain-containing protein | NQ490_07615 | Not Available | + | 1596840 - 1597394 | 19711.7 |
| hypothetical protein | NQ490_07620 | Not Available | + | 1597372 - 1597818 | 15121.7 |
| helix-turn-helix domain-containing protein | NQ490_07625 | P96631 | + | 1598283 - 1598744 | 17770.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.