Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_07380 | Not Available | + | 1537075 - 1538634 | 57326.3 |
| l,d-transpeptidase | NQ490_07385 | C0SP99 | - | 1539012 - 1539956 | 34442.9 |
| pyridoxal phosphate-dependent aminotransferase | NQ490_07390 | O07587 | - | 1540085 - 1541281 | 43780.0 |
| had family hydrolase | NQ490_07395 | Q87L12 | - | 1541387 - 1542046 | 23890.2 |
| undecaprenyl-diphosphate phosphatase | NQ490_07400 | Q831R1 | + | 1542238 - 1543098 | 31468.8 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | NQ490_07405 | Q2RMD6 | - | 1543476 - 1547015 | 128349.0 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | NQ490_07410 | P44740 | - | 1547319 - 1548002 | 25210.2 |
| hypothetical protein | NQ490_07415 | Not Available | + | 1548135 - 1548629 | 17206.7 |
| abc transporter atp-binding protein | NQ490_07420 | Q58903 | + | 1549059 - 1549853 | 29017.3 |
| hypothetical protein | NQ490_07425 | Not Available | + | 1549877 - 1551358 | 51829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.