Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_07330 | Not Available | - | 1529152 - 1529568 | 15831.1 |
| lpxtg cell wall anchor domain-containing protein | NQ490_07335 | Not Available | + | 1529647 - 1530192 | 18921.1 |
| class b sortase | NQ490_07340 | Q8Y588 | + | 1530291 - 1531040 | 28165.7 |
| site-specific integrase | NQ490_07345 | Q8R890 | + | 1531155 - 1532342 | 45573.8 |
| Trna-met | Not Available | Not Available | + | 1532391 - 1532467 | Not Available |
| family 10 glycosylhydrolase | NQ490_07355 | O35015 | + | 1532748 - 1533986 | 44200.5 |
| winged helix-turn-helix domain-containing protein | NQ490_07360 | Q2FY79 | - | 1533964 - 1534353 | 15269.5 |
| hypothetical protein | NQ490_07365 | Not Available | - | 1534449 - 1534736 | 11297.5 |
| atp-dependent zinc metalloprotease ftsh | NQ490_07370 | C8W731 | + | 1534800 - 1536680 | 68472.4 |
| phosphopantetheine-binding protein | NQ490_07375 | B5Z6T1 | + | 1536773 - 1537012 | 8748.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.