Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | NQ490_07180 | Not Available | - | 1501451 - 1501759 | 11954.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | NQ490_07185 | Not Available | - | 1501752 - 1502063 | 11794.0 |
| hypothetical protein | NQ490_07190 | Not Available | + | 1502217 - 1505201 | 106665.0 |
| hypothetical protein | NQ490_07195 | Not Available | + | 1505176 - 1505706 | 18827.7 |
| prgi family protein | NQ490_07200 | Not Available | + | 1505707 - 1506141 | 16549.3 |
| atp-binding protein | NQ490_07205 | Not Available | + | 1506138 - 1508477 | 89013.6 |
| phosphoadenosine phosphosulfate reductase | NQ490_07210 | Not Available | + | 1508533 - 1509273 | 28882.9 |
| duf6075 family protein | NQ490_07215 | Not Available | + | 1509290 - 1509682 | 15746.4 |
| duf1273 domain-containing protein | NQ490_07220 | Q9KC06 | - | 1509684 - 1510160 | 17977.7 |
| helix-turn-helix domain-containing protein | NQ490_07225 | P16117 | + | 1510286 - 1510624 | 12870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.