Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | NQ490_07080 | A0A3R0A696 | - | 1475748 - 1476860 | 37170.6 |
| jag n-terminal domain-containing protein | NQ490_07085 | D0VX24 | - | 1477047 - 1478138 | 39232.1 |
| yidc/oxa1 family membrane protein insertase | NQ490_07090 | B4S6X1 | - | 1478154 - 1479173 | 38056.3 |
| membrane protein insertion efficiency factor yidd | NQ490_07095 | Q1IV77 | - | 1479488 - 1479742 | 9639.14 |
| ribonuclease p protein component | NQ490_07100 | A7FPL5 | - | 1479739 - 1480122 | 14240.5 |
| 50s ribosomal protein l34 | NQ490_07105 | B3WBV7 | - | 1480522 - 1480656 | 5281.69 |
| chromosomal replication initiator protein dnaa | NQ490_07110 | A7FPR6 | + | 1481041 - 1482351 | 49444.1 |
| dna polymerase iii subunit beta | NQ490_07115 | P05649 | + | 1482843 - 1483952 | 40950.0 |
| rna-binding s4 domain-containing protein | NQ490_07120 | P0AAS7 | + | 1483957 - 1484172 | 7594.27 |
| dna replication/repair protein recf | NQ490_07125 | B9E903 | + | 1484172 - 1485275 | 39915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.