Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | NQ490_07030 | Q67J33 | + | 1465111 - 1466502 | 48643.1 |
| hypothetical protein | NQ490_07035 | Not Available | + | 1466518 - 1466982 | 17201.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | NQ490_07040 | A4XN50 | + | 1467013 - 1468905 | 69199.9 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | NQ490_07045 | Q2RFJ0 | + | 1468898 - 1469602 | 25512.0 |
| parb/repb/spo0j family partition protein | NQ490_07050 | Q926W4 | + | 1469727 - 1470665 | 33870.0 |
| aaa family atpase | NQ490_07055 | Q9K5N0 | + | 1471075 - 1471839 | 28005.0 |
| parb/repb/spo0j family partition protein | NQ490_07060 | Q72H91 | + | 1471853 - 1472737 | 31990.5 |
| serine--trna ligase | NQ490_07065 | O58441 | + | 1472774 - 1474081 | 49314.6 |
| Trna-met | Not Available | Not Available | + | 1474575 - 1474651 | Not Available |
| Trna-glu | Not Available | Not Available | + | 1474745 - 1474816 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.