Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | NQ490_06930 | P96629 | + | 1439497 - 1440654 | 44533.4 |
| site-specific integrase | NQ490_06935 | P96629 | + | 1440876 - 1442051 | 44849.0 |
| pts transporter subunit eiic | NQ490_06940 | P40739 | - | 1442113 - 1443462 | 47365.2 |
| family 1 glycosylhydrolase | NQ490_06945 | P24240 | - | 1443489 - 1444955 | 56274.5 |
| arac family transcriptional regulator | NQ490_06950 | B1JNC4 | + | 1445093 - 1446082 | 38104.8 |
| ribbon-helix-helix domain-containing protein | NQ490_06955 | Not Available | - | 1446124 - 1446327 | 7390.1 |
| is30 family transposase | NQ490_06960 | P15894 | + | 1447073 - 1448356 | 49482.7 |
| atp-binding protein | NQ490_06965 | B9K7B8 | + | 1448889 - 1450436 | 58724.8 |
| z1 domain-containing protein | NQ490_06970 | Not Available | + | 1450426 - 1453251 | 106312.0 |
| pd-(d/e)xk motif protein | NQ490_06975 | Not Available | + | 1453241 - 1454269 | 39283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.