Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toxin glutamine deamidase domain-containing protein | NQ490_06680 | Not Available | - | 1374087 - 1375160 | 38341.4 |
| hypothetical protein | NQ490_06685 | Not Available | - | 1375166 - 1375519 | 12243.5 |
| hypothetical protein | NQ490_06690 | Not Available | - | 1375526 - 1375786 | 8969.58 |
| hypothetical protein | NQ490_06695 | Not Available | - | 1375806 - 1376351 | 21067.7 |
| ftsk/spoiiie domain-containing protein | NQ490_06700 | A4IKE7 | - | 1376348 - 1379068 | 99816.7 |
| nucleotide exchange factor grpe | NQ490_06705 | Q835R8 | - | 1379095 - 1379553 | 17375.8 |
| hsp70 family protein | NQ490_06710 | A3DF25 | - | 1379577 - 1381139 | 56543.0 |
| helix-turn-helix domain-containing protein | NQ490_06715 | Not Available | - | 1381164 - 1381472 | 11623.0 |
| nad(p)/fad-dependent oxidoreductase | NQ490_06720 | P32382 | - | 1381691 - 1383619 | 68436.2 |
| shikimate dehydrogenase | NQ490_06725 | Q92EG7 | - | 1383644 - 1384516 | 30385.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.