Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose pts transporter subunit iia | NQ490_06330 | P20166 | - | 1294606 - 1296735 | 75442.3 |
| prd domain-containing protein | NQ490_06335 | P39805 | - | 1296886 - 1297752 | 33135.1 |
| ai-2e family transporter | NQ490_06340 | O32095 | + | 1298434 - 1299558 | 40514.1 |
| eama family transporter | NQ490_06345 | P29939 | - | 1299616 - 1300029 | 14259.2 |
| marr family transcriptional regulator | NQ490_06350 | P37503 | + | 1300209 - 1300661 | 17441.0 |
| mate family efflux transporter | NQ490_06355 | Q58119 | + | 1300648 - 1302024 | 49442.8 |
| murr/rpir family transcriptional regulator | NQ490_06360 | P44540 | - | 1302086 - 1302934 | 30182.3 |
| abc transporter substrate-binding protein | NQ490_06365 | Not Available | + | 1303470 - 1304837 | 48650.8 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | NQ490_06370 | Not Available | + | 1305176 - 1305721 | 21419.6 |
| radical sam protein | NQ490_06375 | Q46CH7 | - | 1305728 - 1307086 | 51212.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.