Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | NQ490_06230 | P37543 | - | 1273259 - 1273942 | 24462.2 |
| nudix hydrolase | NQ490_06235 | P54570 | - | 1273932 - 1274477 | 20291.2 |
| phosphate signaling complex protein phou | NQ490_06240 | Q97ID9 | - | 1274639 - 1275325 | 25154.3 |
| phosphate abc transporter atp-binding protein pstb | NQ490_06245 | P63371 | - | 1275341 - 1276069 | 27037.7 |
| phosphate abc transporter permease psta | NQ490_06250 | P46340 | - | 1276111 - 1276962 | 30588.4 |
| phosphate abc transporter permease subunit pstc | NQ490_06255 | P46339 | - | 1277018 - 1277920 | 31610.1 |
| substrate-binding domain-containing protein | NQ490_06260 | Q8E310 | - | 1278029 - 1278985 | 32227.9 |
| na/pi cotransporter family protein | NQ490_06265 | P40730 | + | 1279373 - 1281181 | 65184.7 |
| response regulator transcription factor | NQ490_06270 | P0AFJ6 | + | 1281200 - 1281892 | 25595.7 |
| atp-binding protein | NQ490_06275 | A0QR01 | + | 1281885 - 1283285 | 51091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.