Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_05835 | Not Available | + | 1204848 - 1205576 | 26757.2 |
| hypothetical protein | NQ490_05840 | Not Available | + | 1205580 - 1205750 | 6584.02 |
| hypothetical protein | NQ490_05845 | Not Available | + | 1205851 - 1206504 | 23566.3 |
| lysr family transcriptional regulator | NQ490_05850 | P52666 | - | 1206548 - 1207435 | 33195.3 |
| abc transporter atp-binding protein/permease | NQ490_05855 | P54718 | + | 1207610 - 1209349 | 63206.0 |
| abc transporter atp-binding protein/permease | NQ490_05860 | Q9WYC4 | + | 1209364 - 1211253 | 69234.9 |
| aldo/keto reductase | NQ490_05865 | Q8X529 | - | 1211325 - 1212320 | 37077.3 |
| ornithine carbamoyltransferase | NQ490_05870 | A4XLM2 | - | 1212493 - 1213404 | 33687.6 |
| acetylornithine/succinylornithine family transaminase | NQ490_05875 | Q7VMS5 | - | 1213404 - 1214582 | 41478.0 |
| acetylglutamate kinase | NQ490_05880 | B3H084 | - | 1214598 - 1215452 | 30639.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.