Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | NQ490_05685 | O31516 | + | 1165887 - 1167653 | 67726.4 |
| response regulator | NQ490_05690 | O31517 | + | 1167655 - 1169262 | 61875.6 |
| sugar abc transporter substrate-binding protein | NQ490_05695 | Not Available | + | 1169563 - 1171224 | 62790.8 |
| abc transporter permease subunit | NQ490_05700 | C0SPB3 | + | 1171390 - 1172313 | 34368.5 |
| carbohydrate abc transporter permease | NQ490_05705 | P53561 | + | 1172327 - 1173214 | 32798.7 |
| glycoside hydrolase family 43 protein | NQ490_05710 | P45982 | + | 1173389 - 1174951 | 58286.8 |
| is110 family transposase | NQ490_05715 | P20665 | - | 1175439 - 1176440 | 37743.8 |
| hypothetical protein | NQ490_05720 | Not Available | - | 1176873 - 1177742 | 33189.5 |
| hypothetical protein | NQ490_05725 | Not Available | - | 1177742 - 1178695 | 35945.8 |
| hypothetical protein | NQ490_05730 | Not Available | - | 1178676 - 1179098 | 16266.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.