Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| moba/mobl family protein | NQ490_05535 | Q8GN32 | - | 1132455 - 1134140 | 65136.8 |
| duf3847 domain-containing protein | NQ490_05540 | Not Available | - | 1134245 - 1134451 | 8014.76 |
| adenylate cyclase | NQ490_05545 | Not Available | - | 1134756 - 1135127 | 13990.7 |
| hypothetical protein | NQ490_05550 | Not Available | - | 1135129 - 1135377 | 9223.09 |
| hypothetical protein | NQ490_05555 | Not Available | - | 1135340 - 1135552 | 7936.3 |
| tetratricopeptide repeat protein | NQ490_05560 | Not Available | - | 1135736 - 1138063 | 89058.6 |
| is30 family transposase | NQ490_05565 | P15894 | - | 1138404 - 1139687 | 49482.7 |
| recombinase family protein | NQ490_05570 | O32006 | + | 1140047 - 1141648 | 61405.6 |
| is200/is605 family transposase | NQ490_05575 | P04130 | - | 1141809 - 1143314 | 57552.1 |
| helix-turn-helix domain-containing protein | NQ490_05580 | P23789 | - | 1143311 - 1143664 | 13716.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.