Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | NQ490_05485 | P26993 | + | 1119047 - 1119961 | 35074.5 |
| s41 family peptidase | NQ490_05490 | Q44879 | - | 1120005 - 1121801 | 66002.5 |
| arac family transcriptional regulator | NQ490_05495 | P0ACH6 | - | 1122519 - 1123280 | 28408.4 |
| glycogen/starch/alpha-glucan family phosphorylase | NQ490_05500 | P29849 | + | 1123527 - 1125791 | 84574.3 |
| abc transporter substrate-binding protein | NQ490_05505 | Not Available | + | 1126031 - 1127380 | 48457.9 |
| sugar abc transporter permease | NQ490_05510 | P37730 | + | 1127484 - 1128335 | 32022.0 |
| carbohydrate abc transporter permease | NQ490_05515 | P37729 | + | 1128335 - 1129183 | 31823.3 |
| laci family transcriptional regulator | NQ490_05520 | O05103 | + | 1129222 - 1130247 | 37137.5 |
| 4-alpha-glucanotransferase | NQ490_05525 | Q59266 | + | 1130266 - 1131747 | 55481.5 |
| hypothetical protein | NQ490_05530 | Not Available | + | 1131863 - 1132117 | 8796.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.