Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | NQ490_05435 | P09099 | - | 1106574 - 1108049 | 53344.1 |
| sugar abc transporter permease | NQ490_05440 | P45045 | - | 1108083 - 1109255 | 41349.8 |
| sugar abc transporter atp-binding protein | NQ490_05445 | Q9S472 | - | 1109283 - 1110836 | 57652.7 |
| sugar abc transporter substrate-binding protein | NQ490_05450 | P25548 | - | 1110949 - 1112145 | 42383.5 |
| rok family transcriptional regulator | NQ490_05455 | P0AF22 | - | 1112402 - 1113532 | 41751.4 |
| carbohydrate kinase family protein | NQ490_05460 | O29891 | - | 1113714 - 1114775 | 38145.7 |
| class ii fructose-bisphosphate aldolase | NQ490_05465 | P77704 | - | 1114783 - 1115613 | 29609.6 |
| tim barrel protein | NQ490_05470 | P24300 | - | 1115633 - 1116667 | 39116.6 |
| tim barrel protein | NQ490_05475 | P54724 | - | 1116695 - 1117696 | 37673.6 |
| gfo/idh/moca family oxidoreductase | NQ490_05480 | P55480 | - | 1117714 - 1118853 | 41280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.