Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coth kinase family protein | NQ490_05035 | Not Available | - | 1018366 - 1020543 | 81160.7 |
| 50s ribosomal protein l20 | NQ490_05040 | B0K3L3 | - | 1020613 - 1020966 | 13298.6 |
| 50s ribosomal protein l35 | NQ490_05045 | B9L885 | - | 1021025 - 1021231 | 7800.02 |
| translation initiation factor if-3 | NQ490_05050 | Q8R9C2 | - | 1021259 - 1021789 | 19980.6 |
| d-alanine--d-alanine ligase | NQ490_05055 | A4XJ89 | + | 1022119 - 1023231 | 39846.5 |
| glutamate racemase | NQ490_05060 | Q39Y84 | + | 1023231 - 1024046 | 28946.8 |
| duf1934 domain-containing protein | NQ490_05065 | O07624 | + | 1024062 - 1024514 | 16623.7 |
| arginine--trna ligase | NQ490_05070 | Q8R786 | + | 1024541 - 1026298 | 64139.2 |
| gnat family n-acetyltransferase | NQ490_05075 | O07614 | - | 1027608 - 1028081 | 17758.5 |
| methylenetetrahydrofolate dehydrogenase | NQ490_05080 | Not Available | - | 1028247 - 1028480 | 9078.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.