Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| purine permease | NQ490_04835 | P50487 | - | 965246 - 966688 | 49585.1 |
| lysr family transcriptional regulator | NQ490_04840 | Q9F4K4 | - | 966959 - 967822 | 31361.0 |
| alanine:cation symporter family protein | NQ490_04845 | Q6LX42 | + | 968034 - 969413 | 48750.5 |
| trk family potassium uptake protein | NQ490_04850 | P43440 | + | 969586 - 970917 | 46883.5 |
| trka family potassium uptake protein | NQ490_04855 | P39760 | + | 970936 - 971583 | 23567.4 |
| hypothetical protein | NQ490_04860 | Not Available | + | 971605 - 971751 | 5717.87 |
| atp-binding protein | NQ490_04865 | P94608 | + | 971812 - 972915 | 40737.6 |
| response regulator transcription factor | NQ490_04870 | P21866 | + | 972908 - 973600 | 25546.0 |
| glycerol kinase glpk | NQ490_04875 | C4ZGB4 | + | 973802 - 975310 | 55275.0 |
| nad(p)/fad-dependent oxidoreductase | NQ490_04880 | A0A0R3K2G2 | + | 975307 - 976737 | 51058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.