Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | NQ490_04735 | Q7UP89 | + | 937008 - 937853 | 30057.1 |
| lactate racemase domain-containing protein | NQ490_04740 | D9TQ02 | + | 937895 - 939397 | 56469.4 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | NQ490_04745 | B0RP51 | + | 939413 - 940582 | 41537.9 |
| gntr family transcriptional regulator | NQ490_04750 | P0ACM2 | + | 940841 - 941554 | 27855.6 |
| trap transporter substrate-binding protein | NQ490_04755 | P71336 | + | 941772 - 942788 | 37970.6 |
| trap transporter small permease | NQ490_04760 | P44994 | + | 942799 - 943350 | 19966.8 |
| trap transporter large permease subunit | NQ490_04765 | P44993 | + | 943347 - 944630 | 45196.1 |
| zinc-binding alcohol dehydrogenase family protein | NQ490_04770 | O35045 | + | 944684 - 945706 | 37041.5 |
| mannonate dehydratase | NQ490_04775 | Q65L04 | + | 945729 - 946808 | 41065.1 |
| mannitol dehydrogenase family protein | NQ490_04780 | Q9WXS3 | + | 946805 - 948391 | 58398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.