Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | NQ490_04585 | Not Available | + | 906543 - 908582 | 77955.9 |
| hypothetical protein | NQ490_04590 | Not Available | + | 908579 - 909229 | 25313.9 |
| recombinase family protein | NQ490_04595 | Not Available | + | 909329 - 910834 | 57953.4 |
| nadh:flavin oxidoreductase | NQ490_04600 | P32382 | - | 911154 - 912131 | 35236.6 |
| mate family efflux transporter | NQ490_04605 | Q2FJS9 | - | 912162 - 913535 | 48813.4 |
| merr family transcriptional regulator | NQ490_04610 | P96690 | - | 913681 - 914469 | 30277.6 |
| tigr03905 family tscpd domain-containing protein | NQ490_04615 | Not Available | + | 914603 - 914878 | 9893.93 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | NQ490_04620 | Not Available | + | 915053 - 915295 | 9137.85 |
| is200/is605 family transposase | NQ490_04625 | Not Available | + | 915292 - 915670 | 13741.4 |
| hypothetical protein | NQ490_04630 | Not Available | + | 916063 - 916761 | 26584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.