Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | H9L12_08750 | P08395 | + | 1694160 - 1696034 | 64760.9 |
| pepsy domain-containing protein | H9L12_08755 | Not Available | - | 1695964 - 1696722 | 28265.5 |
| dihydrolipoyl dehydrogenase | H9L12_08760 | Q9HUY1 | - | 1696949 - 1698343 | 48709.7 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | H9L12_08765 | Q8GCY1 | - | 1698353 - 1699651 | 45174.9 |
| 2-oxoglutarate dehydrogenase e1 component | H9L12_08770 | B2S877 | - | 1699662 - 1702466 | 102090.0 |
| succinate--coa ligase subunit alpha | H9L12_08775 | Q1RH56 | - | 1702484 - 1703368 | 30417.7 |
| malate dehydrogenase | H9L12_08780 | Q2G946 | - | 1703365 - 1704330 | 33450.7 |
| hypothetical protein | H9L12_08785 | Not Available | + | 1704541 - 1704912 | 13438.2 |
| cell division protein zape | H9L12_08790 | Q8WV93 | - | 1704969 - 1706075 | 40615.9 |
| paai family thioesterase | H9L12_08795 | Not Available | - | 1706059 - 1706562 | 17906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.