Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | H9L12_07555 | O34430 | + | 1477746 - 1478509 | 26304.0 |
| lysr family transcriptional regulator | H9L12_07560 | P52667 | + | 1478570 - 1479496 | 33516.8 |
| catalase/peroxidase hpi | H9L12_07565 | Q2N806 | - | 1479493 - 1481667 | 79430.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | H9L12_07570 | Q1RKM3 | - | 1481771 - 1482337 | 20881.3 |
| mfs transporter | H9L12_07575 | A8AP55 | + | 1482411 - 1483709 | 45810.0 |
| hypothetical protein | H9L12_07580 | Not Available | - | 1483723 - 1483896 | 6366.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | H9L12_07585 | Q9ABX9 | - | 1483995 - 1485509 | 55377.1 |
| Trna-leu | Not Available | Not Available | + | 1485712 - 1485797 | Not Available |
| integration host factor subunit beta | H9L12_07595 | Q06607 | - | 1485832 - 1486128 | 10983.1 |
| 30s ribosomal protein s1 | H9L12_07600 | Q6NDP1 | - | 1486274 - 1487989 | 61567.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.