Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | H9L12_07355 | Q2G9Z8 | + | 1445559 - 1445981 | 15171.8 |
| Tmrna,resume consensus sequence (at 217): cacaagtgccaacgataa | Not Available | Not Available | + | 1446080 - 1446429 | Not Available |
| hypothetical protein | H9L12_07365 | Not Available | + | 1446572 - 1446841 | 8982.1 |
| nudix domain-containing protein | H9L12_07370 | Q7M0H4 | + | 1446955 - 1447704 | 26780.7 |
| extensin family protein | H9L12_07375 | Not Available | + | 1447733 - 1448446 | 26553.4 |
| hypothetical protein | H9L12_07380 | Q05024 | - | 1448534 - 1448803 | 9798.85 |
| ld-carboxypeptidase | H9L12_07385 | O34851 | - | 1448885 - 1449703 | 28932.5 |
| udp-n-acetylmuramate--alanine ligase | H9L12_07390 | A8LS63 | + | 1449751 - 1451151 | 48540.9 |
| hypothetical protein | H9L12_07395 | Not Available | + | 1451158 - 1451529 | 13596.0 |
| hypothetical protein | H9L12_07400 | Q8TCD5 | + | 1451531 - 1452007 | 17799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.