Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | H9L12_04805 | Q17QK3 | - | 985828 - 987225 | 49420.9 |
| atp-dependent dna helicase | H9L12_04810 | P9WL78 | - | 987280 - 988349 | 38625.2 |
| lytic transglycosylase domain-containing protein | H9L12_04815 | P0AGC4 | - | 988399 - 990219 | 65227.8 |
| hypothetical protein | H9L12_04820 | Q5SKC5 | - | 990228 - 990653 | 15484.8 |
| hypothetical protein | H9L12_04825 | Not Available | - | 990653 - 990958 | 10970.8 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | H9L12_04830 | Q9HZP5 | + | 991056 - 992702 | 60535.0 |
| tetratricopeptide repeat protein | H9L12_04835 | Not Available | + | 992779 - 994365 | 56520.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | H9L12_04840 | Q9X3W5 | + | 994365 - 995171 | 27810.2 |
| nad(p)h-hydrate dehydratase | H9L12_04845 | Q2S580 | + | 995181 - 996539 | 45329.5 |
| class i sam-dependent rna methyltransferase | H9L12_04850 | Q9X3W2 | + | 996536 - 997720 | 41729.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.