Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | H9L12_04555 | Q04855 | + | 937026 - 937790 | 27881.5 |
| atp-dependent dna helicase | H9L12_04560 | P45128 | - | 937787 - 941298 | 125294.0 |
| succinate dehydrogenase assembly factor 2 | H9L12_04565 | C7JGP5 | - | 941295 - 941555 | 9890.86 |
| atp-dependent dna helicase | H9L12_04570 | O50224 | + | 941658 - 943714 | 72928.6 |
| tyrosine--trna ligase | H9L12_04575 | Q2G6I4 | - | 943711 - 944937 | 44751.8 |
| domon-like domain-containing protein | H9L12_04580 | Not Available | + | 944993 - 945535 | 19633.8 |
| duf1343 domain-containing protein | H9L12_04585 | P40407 | + | 945543 - 946739 | 44001.5 |
| vwa domain-containing protein | H9L12_04590 | Not Available | - | 946740 - 947921 | 44843.3 |
| chemotaxis protein | H9L12_04595 | Q88IY8 | + | 948034 - 949431 | 50475.6 |
| abc transporter | H9L12_04600 | Not Available | - | 949438 - 950103 | 23367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.