Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | H9L12_04305 | E1V931 | - | 875509 - 876609 | 38240.4 |
| potassium transporter kup | H9L12_04310 | A5V804 | + | 876734 - 878680 | 70417.7 |
| prc-barrel domain-containing protein | H9L12_04315 | Not Available | + | 878713 - 879279 | 19837.6 |
| 2'-5' rna ligase family protein | H9L12_04320 | Not Available | + | 879276 - 879782 | 18641.4 |
| duf3775 domain-containing protein | H9L12_04325 | Not Available | - | 879779 - 880189 | 14630.7 |
| Trna-met | Not Available | Not Available | + | 880325 - 880401 | Not Available |
| sulfate adenylyltransferase subunit cysn | H9L12_04335 | P72339 | - | 880408 - 882315 | 69930.2 |
| sulfate adenylyltransferase subunit cysd | H9L12_04340 | Q9A881 | - | 882315 - 883220 | 34537.3 |
| class i mannose-6-phosphate isomerase | H9L12_04345 | O05511 | - | 883279 - 884079 | 29284.8 |
| atp-dependent dna helicase | H9L12_04350 | Not Available | - | 884141 - 885423 | 45721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.