Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | H9L12_04205 | Q5NNY8 | + | 857678 - 858337 | 24059.0 |
| duf47 family protein | H9L12_04210 | O30498 | + | 858500 - 859558 | 39213.6 |
| inorganic phosphate transporter | H9L12_04215 | O30499 | + | 859568 - 860581 | 35337.6 |
| atp-dependent dna helicase | H9L12_04220 | A5V3U4 | + | 860748 - 862027 | 47180.5 |
| cpbp family intramembrane metalloprotease | H9L12_04225 | Not Available | + | 862044 - 862571 | 18913.4 |
| acyltransferase | H9L12_04230 | Not Available | + | 862668 - 863684 | 37485.0 |
| endopeptidase la | H9L12_04235 | P77810 | + | 863750 - 866152 | 87978.1 |
| hu family dna-binding protein | H9L12_04240 | P0A3H2 | + | 866236 - 866508 | 9907.0 |
| Trna-val | Not Available | Not Available | + | 866579 - 866653 | Not Available |
| crp/fnr family transcriptional regulator | H9L12_04250 | P24290 | - | 866729 - 867340 | 23039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.