Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | H9L12_12050 | Not Available | - | 2353685 - 2354323 | 22800.5 |
| ribonuclease d | H9L12_12055 | A9H9B7 | - | 2354334 - 2354957 | 22970.3 |
| cold-shock protein | H9L12_12060 | P55390 | + | 2355201 - 2356049 | 28126.6 |
| gnat family n-acetyltransferase | H9L12_12065 | Not Available | + | 2356133 - 2356654 | 19371.2 |
| atp-dependent dna helicase | H9L12_12070 | Not Available | - | 2356651 - 2358248 | 56512.1 |
| uv damage endonuclease uvse | H9L12_12075 | B7IR00 | - | 2358249 - 2359268 | 36779.8 |
| hypothetical protein | H9L12_12080 | Not Available | - | 2359304 - 2359615 | 11199.6 |
| hypothetical protein | H9L12_12085 | Not Available | + | 2359692 - 2360480 | 29550.4 |
| 50s ribosomal protein l33 | H9L12_12090 | Q2N758 | + | 2360568 - 2360735 | 6403.88 |
| atp-dependent dna helicase | H9L12_12095 | B2SB45 | - | 2360847 - 2361212 | 13347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.