Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septation protein ispz | H9L12_12000 | A9MPE0 | + | 2341592 - 2342560 | 35126.2 |
| hypothetical protein | H9L12_12005 | Not Available | - | 2342570 - 2342989 | 14974.2 |
| atp-dependent dna helicase | H9L12_12010 | A5VA37 | + | 2343091 - 2344145 | 37420.6 |
| dead/deah box helicase | H9L12_12015 | P25888 | + | 2344347 - 2345924 | 57391.8 |
| peptidase s41 | H9L12_12020 | Not Available | + | 2345984 - 2347429 | 52688.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | H9L12_12025 | P0CAX1 | + | 2347581 - 2350088 | 91664.0 |
| endonuclease/exonuclease/phosphatase family protein | H9L12_12030 | P0AAW3 | + | 2350123 - 2350893 | 28617.7 |
| rna polymerase factor sigma-54 | H9L12_12035 | P30332 | - | 2350890 - 2352347 | 52494.6 |
| lps export abc transporter atp-binding protein | H9L12_12040 | P33982 | - | 2352368 - 2353105 | 26822.5 |
| osta family protein | H9L12_12045 | P25893 | - | 2353152 - 2353679 | 18137.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.