Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | H9L12_09550 | Not Available | + | 1864460 - 1865383 | 33245.2 |
| trna lysidine(34) synthetase tils | H9L12_09555 | Q5NLX8 | + | 1865388 - 1866338 | 34048.5 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | H9L12_09560 | C8WEG0 | + | 1866426 - 1868378 | 70095.5 |
| hypothetical protein | H9L12_09565 | Not Available | + | 1868447 - 1868824 | 13243.3 |
| duf3667 domain-containing protein | H9L12_09570 | Not Available | - | 1868821 - 1869873 | 38654.2 |
| nicotinate-nucleotide adenylyltransferase | H9L12_09575 | Q2N6F4 | + | 1869948 - 1870571 | 23632.8 |
| ribosome silencing factor | H9L12_09580 | Q5NLX3 | + | 1870568 - 1870987 | 15055.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | H9L12_09585 | A5V9D8 | + | 1871004 - 1871426 | 15565.6 |
| peptidoglycan dd-metalloendopeptidase family protein | H9L12_09590 | Not Available | + | 1871426 - 1872604 | 40535.7 |
| s41 family peptidase | H9L12_09595 | Q44879 | + | 1872645 - 1873979 | 47887.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.