Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | H9L12_09400 | Not Available | + | 1831191 - 1832732 | 56173.1 |
| glycoside hydrolase family 3 protein | H9L12_09405 | Q23892 | + | 1832743 - 1834716 | 70273.1 |
| tryptophan 7-halogenase | H9L12_09410 | Q8KHZ8 | + | 1834719 - 1836221 | 56960.7 |
| atp-dependent dna helicase | H9L12_09415 | Q8J0I9 | + | 1836248 - 1837632 | 48829.5 |
| hypothetical protein | H9L12_09420 | Not Available | + | 1837711 - 1837911 | 7375.7 |
| hypothetical protein | H9L12_09425 | Not Available | + | 1838007 - 1838699 | 24641.6 |
| eco57i restriction-modification methylase domain-containing protein | H9L12_09430 | Q9KVZ8 | - | 1838872 - 1840305 | 54219.5 |
| n-6 dna methylase | H9L12_09435 | Q60301 | - | 1840296 - 1842053 | 65603.8 |
| site-specific integrase | H9L12_09440 | Not Available | - | 1842113 - 1843228 | 41379.5 |
| helix-turn-helix domain-containing protein | H9L12_09445 | P22876 | - | 1843719 - 1843886 | 6001.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.