Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | H9L12_09250 | P75874 | + | 1796547 - 1796984 | 15948.3 |
| tldd/pmba family protein | H9L12_09255 | P0AFK1 | - | 1796981 - 1798327 | 46252.3 |
| 4-hydroxybenzoate octaprenyltransferase | H9L12_09260 | Q9VHS7 | - | 1798345 - 1799262 | 32923.5 |
| llm class flavin-dependent oxidoreductase | H9L12_09265 | P0ADV6 | - | 1799291 - 1800274 | 34763.9 |
| pep-cterm sorting domain-containing protein | H9L12_09270 | Not Available | + | 1800351 - 1801220 | 31166.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | H9L12_09275 | Q92J59 | + | 1801217 - 1801957 | 26363.1 |
| glutamate--cysteine ligase | H9L12_09280 | Q9ZNX6 | + | 1802000 - 1803370 | 50863.4 |
| prolyl aminopeptidase | H9L12_09285 | O32449 | + | 1803669 - 1804664 | 36711.0 |
| dna ligase d | H9L12_09290 | Q9I1X7 | - | 1804620 - 1807109 | 91685.9 |
| ku protein | H9L12_09295 | C1F735 | - | 1807111 - 1807995 | 32958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.