Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | H9L12_08950 | Q2G997 | - | 1737162 - 1738517 | 48158.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | H9L12_08955 | A5VDC9 | - | 1738514 - 1739584 | 38437.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | H9L12_08960 | O33804 | - | 1739823 - 1741229 | 48122.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | H9L12_08965 | Q9RNM2 | - | 1741226 - 1742641 | 49798.2 |
| atp-dependent dna helicase | H9L12_08970 | B8H0A0 | - | 1742646 - 1744357 | 61962.9 |
| hypothetical protein | H9L12_08975 | Not Available | - | 1744357 - 1745019 | 22850.8 |
| atp-dependent dna helicase | H9L12_08980 | A5VDD4 | - | 1745016 - 1745962 | 32648.3 |
| division/cell wall cluster transcriptional repressor mraz | H9L12_08985 | Q2RVT5 | - | 1745959 - 1746444 | 18198.9 |
| hypothetical protein | H9L12_08990 | Not Available | - | 1746742 - 1747044 | 10236.2 |
| hypothetical protein | H9L12_08995 | Not Available | - | 1747008 - 1747385 | 13285.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.