Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homocysteine s-methyltransferase family protein | H9L12_08700 | O33465 | - | 1683777 - 1684817 | 36670.7 |
| methylenetetrahydrofolate reductase | H9L12_08705 | P71319 | - | 1684814 - 1685716 | 32606.6 |
| metalloregulator arsr/smtb family transcription factor | H9L12_08710 | Q8TJK1 | - | 1685713 - 1686687 | 35346.2 |
| circumsporozoite protein | H9L12_08715 | Not Available | + | 1686889 - 1687128 | 7748.78 |
| hypothetical protein | H9L12_08720 | Not Available | + | 1687216 - 1687374 | 5511.53 |
| duf1963 domain-containing protein | H9L12_08725 | P96719 | - | 1687371 - 1689395 | 74320.9 |
| pspa/im30 family protein | H9L12_08730 | P0AFM7 | - | 1689487 - 1690278 | 29613.8 |
| atp-dependent dna helicase | H9L12_08735 | Q1GVZ9 | - | 1690513 - 1692152 | 59080.1 |
| co-chaperone groes | H9L12_08740 | A5VBQ5 | - | 1692218 - 1692505 | 10291.4 |
| mate family efflux transporter | H9L12_08745 | Q98D15 | - | 1692645 - 1694048 | 50013.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.