Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | H9L12_08055 | Q2N5R5 | + | 1571108 - 1571482 | 12646.2 |
| l,d-transpeptidase family protein | H9L12_08060 | Not Available | + | 1571663 - 1572214 | 19314.4 |
| pas domain-containing protein | H9L12_08065 | Q2NCA3 | + | 1572351 - 1573835 | 55835.9 |
| response regulator | H9L12_08070 | Q0PEV3 | - | 1573832 - 1574230 | 13802.4 |
| dna-directed rna polymerase subunit beta | H9L12_08075 | Q2GCD7 | + | 1574559 - 1578731 | 153911.0 |
| dna-directed rna polymerase subunit beta' | H9L12_08080 | A5VBZ7 | + | 1578785 - 1583056 | 156836.0 |
| hypothetical protein | H9L12_08085 | Not Available | + | 1583226 - 1584131 | 33306.5 |
| polysaccharide deacetylase family protein | H9L12_08090 | Not Available | - | 1584115 - 1584774 | 24927.6 |
| gfo/idh/moca family oxidoreductase | H9L12_08095 | O42896 | + | 1584972 - 1586000 | 37167.7 |
| hypothetical protein | H9L12_08100 | Not Available | - | 1586033 - 1586299 | 10004.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.