Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | H9L12_07905 | Q92QJ9 | + | 1547300 - 1547740 | 15655.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | H9L12_07910 | P0ABE0 | + | 1547807 - 1548268 | 15838.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | H9L12_07915 | P24182 | + | 1548279 - 1549628 | 49412.3 |
| tonb family protein | H9L12_07920 | Not Available | + | 1549664 - 1550368 | 23306.5 |
| hypothetical protein | H9L12_07925 | Not Available | - | 1550451 - 1551020 | 17774.8 |
| l,d-transpeptidase family protein | H9L12_07930 | P22525 | - | 1551354 - 1552697 | 48752.4 |
| arsenate reductase (glutaredoxin) | H9L12_07935 | Q92R44 | + | 1552924 - 1553271 | 12595.3 |
| leucyl/phenylalanyl-trna--protein transferase | H9L12_07940 | A5V9E5 | + | 1553268 - 1554035 | 26726.8 |
| atp-dependent dna helicase | H9L12_07945 | Q9ZDG9 | - | 1553990 - 1554304 | 11845.2 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | H9L12_07950 | Q54MV7 | - | 1554469 - 1554852 | 14301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.