Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | H9L12_06505 | Q1RIA5 | - | 1293036 - 1293602 | 19951.9 |
| trna (cytidine(34)-2'-o)-methyltransferase | H9L12_06510 | B2IBT9 | + | 1293747 - 1294199 | 16611.1 |
| oxygen-dependent coproporphyrinogen oxidase | H9L12_06515 | Q89SC2 | + | 1294196 - 1295038 | 31523.1 |
| hypothetical protein | H9L12_06520 | Not Available | - | 1295041 - 1295697 | 22480.7 |
| lipoyl(octanoyl) transferase lipb | H9L12_06525 | A5V649 | + | 1295928 - 1296575 | 23137.7 |
| hypothetical protein | H9L12_06530 | Not Available | + | 1296675 - 1296905 | 7827.08 |
| hypothetical protein | H9L12_06535 | Not Available | + | 1297344 - 1297757 | 15734.8 |
| atp-dependent dna helicase | H9L12_06540 | Q7VVJ8 | - | 1297762 - 1298393 | 23076.2 |
| 7-cyano-7-deazaguanine synthase quec | H9L12_06545 | A5V652 | - | 1298390 - 1299061 | 23628.2 |
| duf3147 family protein | H9L12_06550 | Not Available | - | 1299058 - 1299408 | 12413.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.